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Perform code optimization and document cleanup (#1)
## Summary
- add repository-wide quality tooling and verification scaffolding, including CI workflows, pnpm workspace setup, ESLint/Prettier/markdown checks, and generated-output verification helpers
- reorganize skill sources and generation flow by introducing canonical `_source` variants, generator/manifests, reusable helper abstractions, and shared web-automation/browser utilities
- clean up and expand documentation so the root README flows into docs and skill docs, with clearer development, reviewer, installer, and workflow guidance

## Notable changes
- docs flow and consistency cleanup across `README.md`, `docs/README.md`, and related docs
- new scripts for `check`, docs verification, generated-file verification, shell portability, and safe directory replacement
- refactors in Atlassian and web-automation skill runtimes to reduce duplication and centralize reusable code
- changelog, development documentation, and CI surface updates

## Test Plan
- [ ] `pnpm run check`
- [ ] review generated/manifests and skill sync outputs
- [ ] smoke-check docs flow from `README.md` to `docs/README.md` to skill docs

## Notes
- this branch currently includes tracked `skills/web-automation/shared/node_modules` content that should be reviewed carefully as potentially noisy/accidental committed artifacts

Co-authored-by: Stefano Fiorini <stefano.fiorini@firsthorizon.com>
Reviewed-on: #1
2026-05-04 04:41:34 +00:00

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---
name: atlassian
description: Interact with Atlassian Cloud Jira and Confluence through a portable task-oriented CLI for search, issue/page edits, comments, transitions, and bounded raw requests.
---
# Atlassian (Codex)
Portable Atlassian workflows for Codex using a shared TypeScript CLI.
## Requirements
- Node.js 20+
- `pnpm`
- Atlassian Cloud account access
- `ATLASSIAN_BASE_URL`
- `ATLASSIAN_EMAIL`
- `ATLASSIAN_API_TOKEN`
The `ATLASSIAN_*` values may come from the shell environment or a `.env` file in `~/.codex/skills/atlassian/scripts`.
## First-Time Setup
```bash
mkdir -p ~/.codex/skills/atlassian
cp -R skills/atlassian/codex/* ~/.codex/skills/atlassian/
cd ~/.codex/skills/atlassian/scripts
pnpm install
```
## Prerequisite Check (MANDATORY)
Run before using the skill:
```bash
cd ~/.codex/skills/atlassian/scripts
node -e "require.resolve('commander');require.resolve('dotenv');console.log('OK: runtime dependencies installed')"
node -e 'require("dotenv").config({ path: ".env" }); const required = ["ATLASSIAN_BASE_URL", "ATLASSIAN_EMAIL", "ATLASSIAN_API_TOKEN"]; const missing = required.filter((key) => !(process.env[key] || "").trim()); if (missing.length) { console.error("Missing required Atlassian config: " + missing.join(", ")); process.exit(1); } console.log("OK: Atlassian config present")'
pnpm atlassian health
```
If any check fails, stop and return:
`Missing dependency/config: atlassian requires installed CLI dependencies and valid Atlassian Cloud credentials. Configure ATLASSIAN_* in the shell environment or scripts/.env, then retry.`
## Supported Commands
- `pnpm atlassian health`
- `pnpm atlassian jira-search --jql "..."`
- `pnpm atlassian jira-get --issue ABC-123`
- `pnpm atlassian jira-create ... [--dry-run]`
- `pnpm atlassian jira-update ... [--dry-run]`
- `pnpm atlassian jira-comment ... [--dry-run]`
- `pnpm atlassian jira-transitions --issue ABC-123`
- `pnpm atlassian jira-transition ... [--dry-run]`
- `pnpm atlassian conf-search --query "..."`
- `pnpm atlassian conf-get --page 12345`
- `pnpm atlassian conf-create ... [--dry-run]`
- `pnpm atlassian conf-update ... [--dry-run]`
- `pnpm atlassian conf-comment ... [--dry-run]`
- `pnpm atlassian conf-children --page 12345`
- `pnpm atlassian raw --product jira|confluence --method GET|POST|PUT --path ...`
## Usage Examples
- `pnpm atlassian jira-search --jql "project = ENG ORDER BY updated DESC" --max-results 10`
- `pnpm atlassian conf-update --page 12345 --title "Runbook" --body-file page.storage.html --dry-run`
- `pnpm atlassian raw --product confluence --method POST --path "/wiki/api/v2/pages" --body-file page.json --dry-run`
## Safety Rules
- Default output is JSON; prefer that for agent workflows.
- Use `--dry-run` before any mutating command unless the user clearly wants the write to happen immediately.
- Jira long-text fields are converted to ADF locally.
- Confluence page bodies are storage-first in v1.
- `--body-file` must point to workspace-scoped files only; do not use arbitrary system paths.
- `raw` is for explicit edge cases only and does not allow `DELETE`.
## Notes
- Atlassian Cloud is the only first-class target in v1.
- This skill exists so Codex, Claude Code, Cursor Agent, and OpenCode can share the same command surface even when MCP access differs.